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taq polymerase buffer  (New England Biolabs)


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    New England Biolabs taq polymerase buffer
    Taq Polymerase Buffer, supplied by New England Biolabs, used in various techniques. Bioz Stars score: 98/100, based on 3757 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/buffer+mg/Taq+DNA+Polymerase+with+Standard+Taq+(Mg-free)+Buffer/pm42873278-61-12-27
    Average 98 stars, based on 3757 article reviews
    taq polymerase buffer - by Bioz Stars, 2026-11
    98/100 stars

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    Related Articles

    Polymerase Chain Reaction:

    Article Title: Molecular identification of Comstockaspis perniciosa and its associated Aphytis parasitoid in apple orchards of Kazakhstan
    Article Snippet: .. PCR reactions were carried out in a total volume of 25 μL containing 1 U Taq DNA Polymerase (New England Biolabs, USA), 1× Taq buffer, 0.2 mM dNTPs, 0.2 μM of each primer, and 20 ng of template DNA. .. Amplification was performed under the following conditions: initial denaturation at 95 °C for 1 min, followed by amplification cycles consisting of denaturation at 95 °C, annealing at 48 °C for 1 min, and extension at 72 °C for 2 min, with a final extension at 72 °C for 7 min. Sequencing libraries were prepared using the Rapid Barcoding Kit SQK-RBK114.96 (Oxford Nanopore Technologies, Oxford, UK) according to the manufacturer’s recommendations.

    Article Title: Proteinaceous bioactive compounds from Proteus mirabilis MN12 and DF14N suppress bacterial phytopathogens and prime plant defenses
    Article Snippet: .. PCR reactions (50 μL) contained: 1 × reaction buffer (10 mM Tris–HCl, 50 mM KCl, 1.5 mM MgCl2), 0.2 mM each dNTP, 0.5 μM each primer, 1.25 U Taq DNA polymerase (New England Biolabs, Ipswich, MA, USA), and approximately 50 ng template DNA. .. Cycling conditions: initial denaturation 94 °C for 5 min; 35 cycles of 94 °C for 45 s, 55 °C for 45 s, 72 °C for 90 s; final extension 72 °C for 10 min. Amplicons Article in Press Scientific Reports https://doi.org/10.1038/s41598-026-73150-1 were resolved on 1% agarose gels stained with ethidium bromide (0.5 μg/mL), purified using the QIAquick PCR Purification Kit (Qiagen, Hilden, Germany), and sequenced bidirectionally using BigDye Terminator v3.1 chemistry (Applied Biosystems, Foster City, CA, USA) on an ABI 3500 Genetic Analyzer.

    Article Title: Streptococcal mutanobactin mediates interspecies competition with gram-positive bacteria.
    Article Snippet: PCR to amplify constructs for cloning and strain construction were performed using PfuUltra II or PfuUltra II Fusion HS DNA Polymerase (Agilent Technolo gies) or Q5 High-Fidelity DNA Polymerase (NEB). .. Diagnostic PCR was performed using Taq or OneTaq DNA Polymerase (NEB). ..

    Article Title: Tailoring high-cell-density fed-batch fermentation strategies to produce Russell's viper venom-specific single-domain antibody in E. coli.
    Article Snippet: 1 Department of Microbiology, University of Delhi South Campus, New Delhi 110021, India 2 Department of Biological Sciences, Indian Institute of Science Education and Research Mohali, Manauli-140306, Mohali, Punjab, India 3 Centre for Nanoscience & Nanotechnology, University Institute for Emerging Areas in Science and Technology (UIEAST), Panjab University, Chandigarh, India Abstract Attributes of camelid-derived single-domain antibodies (sdAbs), such as enhanced antigen specificity, improved solubility and stability, efficient tissue penetration, and superior biodistribution, make them preferable therapeutics for diverse applications, including the treatment of cancers, neurological disorders, infectious diseases, and intoxication.. Limited availability and high cost of antivenoms necessitate the discovery of alternative neutralizers.. This investigation presents a proof of concept for developing a cost-effective Escherichia coli-based platform to produce high yields of an sdAb specific to Russell’s viper venom, denoted as ‘FRV’.

    Article Title: Impact of vector control on the prevalence of pathogenic trypanosomes circulating in domestic animals in the Campo sleeping sickness focus of Southern Cameroon.
    Article Snippet: Vector control (VC) using Tiny Targets was implemented in the Campo human African trypanosomiasis (HAT) focus in Cameroon from January 2020 to January 2022, where HAT cases continue to be reported annually.. Because human and animal African trypanosomiasis (AAT) share the same tsetse fly vector and trypanosome species circulate sympatrically, this study assessed the impact of VC on trypanosome transmission in domestic animals.. Blood samples were collected from pigs, goats, sheep, and dogs in 2019 (pre-intervention), 2022, and 2023 (post-intervention).

    Diagnostic Assay:

    Article Title: Streptococcal mutanobactin mediates interspecies competition with gram-positive bacteria.
    Article Snippet: PCR to amplify constructs for cloning and strain construction were performed using PfuUltra II or PfuUltra II Fusion HS DNA Polymerase (Agilent Technolo gies) or Q5 High-Fidelity DNA Polymerase (NEB). .. Diagnostic PCR was performed using Taq or OneTaq DNA Polymerase (NEB). ..

    Neutralization:

    Article Title: Mapping Genetic Modifiers Affecting Photoreceptor Degeneration and Axial Length in Eyes from Homozygous Mfrprd6 Mice
    Article Snippet: .. DNA was obtained by digesting mouse tail tips in 120 μL of 50 mM sodium hydroxide for 30 min at 90 ◦C, followed by neutralization with 30 μL of Tris (pH 8.0), and by centrifugation of the solution at 3600 RPM for 6 min. Each tube received a core mix of 11 μL, which consisted of 6.20 μL of dH2O, 2.00 μL of Cresol Red dye (Sigma Aldrich, St. Louis, MO, USA), 1.10 μL of 10X Standard Taq Reaction Buffer (New England Biolabs, Ipswich, MA, USA), 0.25 μL of 10 mM dNTP (New England Biolabs), 0.20 μL of 10 mM of each primer, 0.05 μL of Taq DNA polymerase (New England Biolabs), and 1.00 μL of DNA solution. ..

    Centrifugation:

    Article Title: Mapping Genetic Modifiers Affecting Photoreceptor Degeneration and Axial Length in Eyes from Homozygous Mfrprd6 Mice
    Article Snippet: .. DNA was obtained by digesting mouse tail tips in 120 μL of 50 mM sodium hydroxide for 30 min at 90 ◦C, followed by neutralization with 30 μL of Tris (pH 8.0), and by centrifugation of the solution at 3600 RPM for 6 min. Each tube received a core mix of 11 μL, which consisted of 6.20 μL of dH2O, 2.00 μL of Cresol Red dye (Sigma Aldrich, St. Louis, MO, USA), 1.10 μL of 10X Standard Taq Reaction Buffer (New England Biolabs, Ipswich, MA, USA), 0.25 μL of 10 mM dNTP (New England Biolabs), 0.20 μL of 10 mM of each primer, 0.05 μL of Taq DNA polymerase (New England Biolabs), and 1.00 μL of DNA solution. ..

    Ligation:

    Article Title: Guanine content in the CTCF motif encodes a vulnerability to persistent, alcohol-induced redistribution
    Article Snippet: Next, digested chromatin was incubated at 65°C for 20 minutes to inactivate DpnII, after which time restriction fragment overhangs were marked with biotin and repaired by incubation at 37°C for one hour in the presence of fill-in master mix (15 ul of 1 mM biotin-14-dATP, 1.5 ul of 10 mM dCTP, 1.5 ul of 10 mM dGTP, 1.5 ul of 10 mM dTTP, 22.5 ul water, and 8 ul of 5 U/ul DNA polymerase I, Large (Klenow) Fragment (NEB M0210)). .. 900 ul ligation master mix was then added and cells incubated with slow rotation overnight (669 ul water, 120 ul of 10X NEB T4 DNA ligase buffer (NEB B0202), 100 ul of 10% Triton X-100, 6 ul of 20 mg/ml bovine serum albumin, 5 ul of 400 U/ul T4 DNA Ligase (NEB M0202)). .. The next day, protein was degraded by proteinase K (NEB P8107) and SDS with 55°C incubation for 30 minutes.

    Incubation:

    Article Title: Guanine content in the CTCF motif encodes a vulnerability to persistent, alcohol-induced redistribution
    Article Snippet: Next, digested chromatin was incubated at 65°C for 20 minutes to inactivate DpnII, after which time restriction fragment overhangs were marked with biotin and repaired by incubation at 37°C for one hour in the presence of fill-in master mix (15 ul of 1 mM biotin-14-dATP, 1.5 ul of 10 mM dCTP, 1.5 ul of 10 mM dGTP, 1.5 ul of 10 mM dTTP, 22.5 ul water, and 8 ul of 5 U/ul DNA polymerase I, Large (Klenow) Fragment (NEB M0210)). .. 900 ul ligation master mix was then added and cells incubated with slow rotation overnight (669 ul water, 120 ul of 10X NEB T4 DNA ligase buffer (NEB B0202), 100 ul of 10% Triton X-100, 6 ul of 20 mg/ml bovine serum albumin, 5 ul of 400 U/ul T4 DNA Ligase (NEB M0202)). .. The next day, protein was degraded by proteinase K (NEB P8107) and SDS with 55°C incubation for 30 minutes.

    Amplification:

    Article Title: Tailoring high-cell-density fed-batch fermentation strategies to produce Russell's viper venom-specific single-domain antibody in E. coli.
    Article Snippet: 1 Department of Microbiology, University of Delhi South Campus, New Delhi 110021, India 2 Department of Biological Sciences, Indian Institute of Science Education and Research Mohali, Manauli-140306, Mohali, Punjab, India 3 Centre for Nanoscience & Nanotechnology, University Institute for Emerging Areas in Science and Technology (UIEAST), Panjab University, Chandigarh, India Abstract Attributes of camelid-derived single-domain antibodies (sdAbs), such as enhanced antigen specificity, improved solubility and stability, efficient tissue penetration, and superior biodistribution, make them preferable therapeutics for diverse applications, including the treatment of cancers, neurological disorders, infectious diseases, and intoxication.. Limited availability and high cost of antivenoms necessitate the discovery of alternative neutralizers.. This investigation presents a proof of concept for developing a cost-effective Escherichia coli-based platform to produce high yields of an sdAb specific to Russell’s viper venom, denoted as ‘FRV’.

    Cloning:

    Article Title: Tailoring high-cell-density fed-batch fermentation strategies to produce Russell's viper venom-specific single-domain antibody in E. coli.
    Article Snippet: 1 Department of Microbiology, University of Delhi South Campus, New Delhi 110021, India 2 Department of Biological Sciences, Indian Institute of Science Education and Research Mohali, Manauli-140306, Mohali, Punjab, India 3 Centre for Nanoscience & Nanotechnology, University Institute for Emerging Areas in Science and Technology (UIEAST), Panjab University, Chandigarh, India Abstract Attributes of camelid-derived single-domain antibodies (sdAbs), such as enhanced antigen specificity, improved solubility and stability, efficient tissue penetration, and superior biodistribution, make them preferable therapeutics for diverse applications, including the treatment of cancers, neurological disorders, infectious diseases, and intoxication.. Limited availability and high cost of antivenoms necessitate the discovery of alternative neutralizers.. This investigation presents a proof of concept for developing a cost-effective Escherichia coli-based platform to produce high yields of an sdAb specific to Russell’s viper venom, denoted as ‘FRV’.

    Recombinant:

    Article Title: A Collective CRISPR-Cas12a Biosensing Platform for Effect-Based Screening of Pesticide Residues
    Article Snippet: The sequences of the crRNA, template strand (TS), non-template strand (NTS), and fluorescence-quenched (FQ) reporter probe are summarized as follows: crRNA (5′-UAAUUUCUACUAAGUGUAGAUCUCAGGGCGGACGAGGUUUAGGAU-3′) TS (5′-ATCCTAAACCTCGTCCGCCCTGAGCAA-Azide-3′) NTS (5′-alkyne-GATCTCAGGGCGGACGAGGTTTAGGAT-3′) FQ reporter (5′-FAM-TTTTTTTTTTTTTTT-BHQ1-3′) Recombinant LbCas12a, 5× TBE buffer (89 mM Tris, 89 mM boric acid, 2.0 mM EDTA, pH 8.3), and diethylpyrocarbonate (DEPC)-treated water were purchased from Sangon Biotech Co., Ltd. (Shanghai, China). .. 10× rCutSmart buffer (50 mM CH3COOK, 20 mM Tris-acetate, 10 mM Mg(CH3COO)2, 100 μg/mL recombinant albumin, pH 7.9) was obtained from New England Biolabs (Beijing, China). .. Ammonium persulfate (APS) and tetramethylethylenediamine (TEMED) were procured from Beyotime Biotechnology (Shanghai, China).



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    ( A ) Quantification of Hox RNA expression in larval sensory neurons. The flow diagram (beginning bottom left) shows how sensory neurons were collected from dissected first instar larvae using fluorescence-activated cell sorting (FACS). RNA was extracted from the sorted cells and reverse transcribed to <t>DNA</t> for amplification of Hox gene products via <t>polymerase</t> chain reaction (PCR). The photograph (bottom right) shows an agarose gel electrophoresis following RT-PCR of Hox genes Antp , Ubx , abd-A and Abd-B . For each gene, ‘no tem’ indicates a no template cDNA control, ‘no RT’ indicates a no reverse transcription control, and ‘exp’ indicates the experimental lane. ( B ) Self-righting times of first instar larvae expressing a Hox gene RNAi construct in the 109(2)80 domain. ***p < 0.001, *p < 0.05 for Wilcoxon rank sum tests, n = 19–30. ( C–F ) Confocal images of immunolabelled stage 16 109(2)80>mCD8::GFP embryos. In each case, the large left panel is a maximum intensity z-projection. The white square indicates the region that is zoomed in the smaller panels to the right. These smaller panels show an individual z slice in the two separate channels and the channel overlay. Triangles indicate cells showing clear signal for Hox protein, and arrowheads indicate cells lacking signal for Hox protein. The strips on the right are zoomed sections of the z-projection, showing a range of cells in one embryonic hemisegment. The putative identities of these cells are indicated by red lines in accordance with the canonical hemisegmental diagram on the far right. ( C ) Embryo immunolabelled for Antp and GFP, dorsal view. ( D ) Embryo immunolabelled for Antp and GFP, ventrolateral view. ( E ) Embryo immunolabelled for Abd-B and GFP, dorsal view. ( F ) Embryo labelled for Abd-B and GFP, ventrolateral view. Figure 6—source data 1. Original file of the full raw uncropped, unedited gel image depicting an agarose gel electrophoresis stained with ethidium bromide where the products of several RT-PCR reactions including no DNA template controls, no RT control and experimentals using primers specific for RP49 and the Hox genes Antennapedia , Ultrabithorax , abdominal A , and Abdominal B were resolved. Figure 6—source data 2. Labelled original file of the full raw uncropped, unedited gel image depicting an agarose gel electrophoresis stained with ethidium bromide where the products of several RT-PCR reactions including no template controls, no RT control and experimentals using primers specific for RP49 and the Hox genes Antennapedia , Ultrabithorax , abdominal A , and Abdominal B were resolved. Labels have been added indicating the relevant primer pairs used in each well (see bracket at the top) as well as the nature of the reaction (e.g. no DNA template, no RT control, experimental) for each primer pair. Amplicons (bands) of the expected size for each amplification reaction are labelled with asterisks.
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    Image Search Results


    ( A ) Quantification of Hox RNA expression in larval sensory neurons. The flow diagram (beginning bottom left) shows how sensory neurons were collected from dissected first instar larvae using fluorescence-activated cell sorting (FACS). RNA was extracted from the sorted cells and reverse transcribed to DNA for amplification of Hox gene products via polymerase chain reaction (PCR). The photograph (bottom right) shows an agarose gel electrophoresis following RT-PCR of Hox genes Antp , Ubx , abd-A and Abd-B . For each gene, ‘no tem’ indicates a no template cDNA control, ‘no RT’ indicates a no reverse transcription control, and ‘exp’ indicates the experimental lane. ( B ) Self-righting times of first instar larvae expressing a Hox gene RNAi construct in the 109(2)80 domain. ***p < 0.001, *p < 0.05 for Wilcoxon rank sum tests, n = 19–30. ( C–F ) Confocal images of immunolabelled stage 16 109(2)80>mCD8::GFP embryos. In each case, the large left panel is a maximum intensity z-projection. The white square indicates the region that is zoomed in the smaller panels to the right. These smaller panels show an individual z slice in the two separate channels and the channel overlay. Triangles indicate cells showing clear signal for Hox protein, and arrowheads indicate cells lacking signal for Hox protein. The strips on the right are zoomed sections of the z-projection, showing a range of cells in one embryonic hemisegment. The putative identities of these cells are indicated by red lines in accordance with the canonical hemisegmental diagram on the far right. ( C ) Embryo immunolabelled for Antp and GFP, dorsal view. ( D ) Embryo immunolabelled for Antp and GFP, ventrolateral view. ( E ) Embryo immunolabelled for Abd-B and GFP, dorsal view. ( F ) Embryo labelled for Abd-B and GFP, ventrolateral view. Figure 6—source data 1. Original file of the full raw uncropped, unedited gel image depicting an agarose gel electrophoresis stained with ethidium bromide where the products of several RT-PCR reactions including no DNA template controls, no RT control and experimentals using primers specific for RP49 and the Hox genes Antennapedia , Ultrabithorax , abdominal A , and Abdominal B were resolved. Figure 6—source data 2. Labelled original file of the full raw uncropped, unedited gel image depicting an agarose gel electrophoresis stained with ethidium bromide where the products of several RT-PCR reactions including no template controls, no RT control and experimentals using primers specific for RP49 and the Hox genes Antennapedia , Ultrabithorax , abdominal A , and Abdominal B were resolved. Labels have been added indicating the relevant primer pairs used in each well (see bracket at the top) as well as the nature of the reaction (e.g. no DNA template, no RT control, experimental) for each primer pair. Amplicons (bands) of the expected size for each amplification reaction are labelled with asterisks.

    Journal: eLife

    Article Title: Region-specific mechanosensation modulates Drosophila postural control behaviour

    doi: 10.7554/eLife.108505

    Figure Lengend Snippet: ( A ) Quantification of Hox RNA expression in larval sensory neurons. The flow diagram (beginning bottom left) shows how sensory neurons were collected from dissected first instar larvae using fluorescence-activated cell sorting (FACS). RNA was extracted from the sorted cells and reverse transcribed to DNA for amplification of Hox gene products via polymerase chain reaction (PCR). The photograph (bottom right) shows an agarose gel electrophoresis following RT-PCR of Hox genes Antp , Ubx , abd-A and Abd-B . For each gene, ‘no tem’ indicates a no template cDNA control, ‘no RT’ indicates a no reverse transcription control, and ‘exp’ indicates the experimental lane. ( B ) Self-righting times of first instar larvae expressing a Hox gene RNAi construct in the 109(2)80 domain. ***p < 0.001, *p < 0.05 for Wilcoxon rank sum tests, n = 19–30. ( C–F ) Confocal images of immunolabelled stage 16 109(2)80>mCD8::GFP embryos. In each case, the large left panel is a maximum intensity z-projection. The white square indicates the region that is zoomed in the smaller panels to the right. These smaller panels show an individual z slice in the two separate channels and the channel overlay. Triangles indicate cells showing clear signal for Hox protein, and arrowheads indicate cells lacking signal for Hox protein. The strips on the right are zoomed sections of the z-projection, showing a range of cells in one embryonic hemisegment. The putative identities of these cells are indicated by red lines in accordance with the canonical hemisegmental diagram on the far right. ( C ) Embryo immunolabelled for Antp and GFP, dorsal view. ( D ) Embryo immunolabelled for Antp and GFP, ventrolateral view. ( E ) Embryo immunolabelled for Abd-B and GFP, dorsal view. ( F ) Embryo labelled for Abd-B and GFP, ventrolateral view. Figure 6—source data 1. Original file of the full raw uncropped, unedited gel image depicting an agarose gel electrophoresis stained with ethidium bromide where the products of several RT-PCR reactions including no DNA template controls, no RT control and experimentals using primers specific for RP49 and the Hox genes Antennapedia , Ultrabithorax , abdominal A , and Abdominal B were resolved. Figure 6—source data 2. Labelled original file of the full raw uncropped, unedited gel image depicting an agarose gel electrophoresis stained with ethidium bromide where the products of several RT-PCR reactions including no template controls, no RT control and experimentals using primers specific for RP49 and the Hox genes Antennapedia , Ultrabithorax , abdominal A , and Abdominal B were resolved. Labels have been added indicating the relevant primer pairs used in each well (see bracket at the top) as well as the nature of the reaction (e.g. no DNA template, no RT control, experimental) for each primer pair. Amplicons (bands) of the expected size for each amplification reaction are labelled with asterisks.

    Article Snippet: cDNA was then amplified via PCR using standard Taq DNA polymerase (NEB) for 40 cycles and with annealing temperature of 60°C.

    Techniques: RNA Expression, Fluorescence, FACS, Reverse Transcription, Amplification, Polymerase Chain Reaction, Agarose Gel Electrophoresis, Reverse Transcription Polymerase Chain Reaction, Control, Expressing, Construct, Confocal, Staining